Teruki Honma: search on Z-Library

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1

Combining Machine Learning and Pharmacophore-Based Interaction Fingerprint for in Silico Screening

Sato, Tomohiro, Honma, Teruki, Yokoyama, Shigeyuki

Journal:

Journal of Chemical Information and Modeling

Year:

2010

Language:

english

File:

PDF, 6.16 MB

english, 2010

2

Prediction of Ligand-Induced Structural Polymorphism of Receptor Interaction Sites Using Machine Learning

Takaya, Daisuke, Sato, Tomohiro, Yuki, Hitomi, Sasaki, Shunta, Tanaka, Akiko, Yokoyama, Shigeyuki, Honma, Teruki

Journal:

Journal of Chemical Information and Modeling

Year:

2013

Language:

english

File:

PDF, 583 KB

english, 2013

3

Structural basis of protein arginine rhamnosylation by glycosyltransferase EarP

Sengoku, Toru, Suzuki, Takehiro, Dohmae, Naoshi, Watanabe, Chiduru, Honma, Teruki, Hikida, Yasushi, Yamaguchi, Yoshiki, Takahashi, Hideyuki, Yokoyama, Shigeyuki, Yanagisawa, Tatsuo

Journal:

Nature Chemical Biology

Year:

2018

Language:

english

File:

PDF, 2.70 MB

english, 2018

4

Structural Insights into the Molecular Design of Flutolanil Derivatives Targeted for Fumarate Respiration of Parasite Mitochondria

Inaoka, Daniel, Shiba, Tomoo, Sato, Dan, Balogun, Emmanuel, Sasaki, Tsuyoshi, Nagahama, Madoka, Oda, Masatsugu, Matsuoka, Shigeru, Ohmori, Junko, Honma, Teruki, Inoue, Masayuki, Kita, Kiyoshi, Harada,

Journal:

International Journal of Molecular Sciences

Year:

2015

Language:

english

File:

PDF, 10.27 MB

english, 2015

5

Discovery of trypanocidal coumarins with dual inhibition of both the glycerol kinase and alternative oxidase of Trypanosoma brucei brucei

Balogun, Emmanuel Oluwadare, Inaoka, Daniel Ken, Shiba, Tomoo, Tsuge, Chiaki, May, Benjamin, Sato, Tomohiro, Kido, Yasutoshi, Nara, Takeshi, Aoki, Takashi, Honma, Teruki, Tanaka, Akiko, Inoue, Masayuk

Journal:

The FASEB Journal

Year:

2019

Language:

english

File:

PDF, 2.02 MB

english, 2019

6

ChemInform Abstract: Total Synthesis of (+)-Obtusenyne.

Kenshu Fujiwara, Daisuke Awakura, Misa Tsunashima, Akira Nakamura, Teruki Honma, Akio Murai

Journal:

Year:

1999

File:

PDF, 25 KB

1999

7

ChemInform Abstract: Synthesis and Biological Activities of NB-506 Analogues: Effects of the Positions of Two Hydroxyl Groups at the Indole Rings.

Mitsuru Ohkubo, Teruyuki Nishimura, Teruki Honma, Ikuko Nishimura, Satoru Ito, Tomoko Yoshinari, Hiroharu Arakawa, Hiroyuki Suda, Hajime Morishima, Susumu Nishimura

Journal:

Year:

2000

File:

PDF, 28 KB

2000

8

ChemInform Abstract: Synthesis and Biological Activities of NB-506 Analogues Modified at the Glucose Group.

Mitsuru Ohkubo, Teruyuki Nishimura, Hiroshi Kawamoto, Masato Nakano, Teruki Honma, Tomoko Yoshinari, Hiroharu Arakawa, Hiroyuki Suda, Hajime Morishima, Susumu Nishimura

Journal:

Year:

2000

File:

PDF, 33 KB

2000

9

Recent Advances in de novo Design Strategy for Practical Lead Identification

Journal:

Year:

2003

File:

PDF, 65 KB

2003

10

Recent advances in de novo design strategy for practical lead identification

Journal:

Medicinal Research Reviews

Year:

2003

Language:

english

File:

PDF, 772 KB

english, 2003

11

Biogenetic intermediates, (3e and 3z,12z)-laurediols and (3e and 3z)-12,13- dihydrolaurediols, isolated from Laurencia nipponica

Akio Fukuzawa, Teruki Honma, Yasunori Takasugi, Akio Murai

Journal:

Year:

1993

Language:

english

File:

PDF, 347 KB

english, 1993

12

A fluorescence correlation spectroscopy-based assay for fragment screening of slowly inhibiting protein–peptide interaction inhibitors

Junko Mikuni, Miki Kato, Shigenao Taruya, Keiko Tsuganezawa, Masumi Mori, Naoko Ogawa, Teruki Honma, Shigeyuki Yokoyama, Hirotatsu Kojima, Takayoshi Okabe, Tetsuo Nagano, Akiko Tanaka

Journal:

Analytical Biochemistry

Year:

2010

Language:

english

File:

PDF, 509 KB

english, 2010

13

Structure–activity relationship study of novel NR2B-selective antagonists with arylamides to avoid reactive metabolites formation

Makoto Kawai, Isao Sakurada, Asato Morita, Yuko Iwamuro, Kazuo Ando, Hirofumi Omura, Sachiko Sakakibara, Tsutomu Masuda, Hiroki Koike, Teruki Honma, Kazunari Hattori, Tadayuki Takashima, Kunihiko Mizu

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2007

Language:

english

File:

PDF, 216 KB

english, 2007

14

Predicting human liver microsomal stability with machine learning techniques

Yojiro Sakiyama, Hitomi Yuki, Takashi Moriya, Kazunari Hattori, Misaki Suzuki, Kaoru Shimada, Teruki Honma

Journal:

Journal of Molecular Graphics and Modelling

Year:

2008

Language:

english

File:

PDF, 709 KB

english, 2008

15

Synthesis of Dissymmetric Indolocarbazole Glycosides Using the Mitsunobu Reaction at the Glycosylation Step

Mitsuru Ohkubo, Teruyuki Nishimura, Hideki Jona, Teruki Honma, Satoru Ito, Hajime Morishima

Journal:

Year:

1997

Language:

english

File:

PDF, 1.63 MB

english, 1997

16

Synthesis and biological activities of NB-506 analogues modified at the glucose group

Mitsuru Ohkubo, Teruyuki Nishimura, Hiroshi Kawamoto, Masato Nakano, Teruki Honma, Tomoko Yoshinari, Hiroharu Arakawa, Hiroyuki Suda, Hajime Morishima, Susumu Nishimura

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2000

Language:

english

File:

PDF, 142 KB

english, 2000

17

Synthesis and biological activities of NB-506 analogues: Effects of the positions of two hydroxyl groups at the indole rings

Mitsuru Ohkubo, Teruyuki Nishimura, Teruki Honma, Ikuko Nishimura, Satoru Ito, Tomoko Yoshinari, Hiroharu Arakawa, Hiroyuki Suda, Hajime Morishima, Susumu Nishimura

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

1999

Language:

english

File:

PDF, 264 KB

english, 1999

18

Practical synthesis of indolopyrrolocarbazoles

Mitsuru Ohkubo, Teruyuki Nishimura, Hideki Jona, Teruki Honma, Hajime Morishima

Journal:

Year:

1996

Language:

english

File:

PDF, 896 KB

english, 1996

19

Clavus detected incidentally by positron emission tomography with computed tomography

Teruki DAINICHI, Yutaka HONMA, Takashi HASHIMOTO, Masutaka FURUE

Journal:

The Journal of Dermatology

Year:

2008

Language:

english

File:

PDF, 69 KB

english, 2008

20

Application of Support Vector Machine to Three-Dimensional Shape-Based Virtual Screening Using Comprehensive Three-Dimensional Molecular Shape Overlay with Known Inhibitors

Sato, Tomohiro, Yuki, Hitomi, Takaya, Daisuke, Sasaki, Shunta, Tanaka, Akiko, Honma, Teruki

Journal:

Journal of Chemical Information and Modeling

Year:

2012

Language:

english

File:

PDF, 3.87 MB

english, 2012

21

A new method for induced fit docking (genius) and its application to virtual screening of novel HCV NS3-4A protease inhibitors

Daisuke Takaya, Atsuya Yamashita, Kazue Kamijo, Junko Gomi, Masahiko Ito, Shinya Maekawa, Nobuyuki Enomoto, Naoya Sakamoto, Yoshiaki Watanabe, Ryoichi Arai, Hideaki Umeyama, Teruki Honma, Takehisa Mat

Journal:

Bioorganic & Medicinal Chemistry

Year:

2011

Language:

english

File:

PDF, 1.07 MB

english, 2011

22

Prediction of sites of metabolism in a substrate molecule, instanced by carbamazepine oxidation by CYP3A4

Hitomi Yuki, Teruki Honma, Masayuki Hata, Tyuji Hoshino

Journal:

Bioorganic & Medicinal Chemistry

Year:

2012

Language:

english

File:

PDF, 1.27 MB

english, 2012

23

A Novel Pim-1 Kinase Inhibitor Targeting Residues That Bind the Substrate Peptide

Keiko Tsuganezawa, Hisami Watanabe, Lorien Parker, Hitomi Yuki, Shigenao Taruya, Yukari Nakagawa, Daisuke Kamei, Masumi Mori, Naoko Ogawa, Yuri Tomabechi, Noriko Handa, Teruki Honma, Shigeyuki Yokoyam

Journal:

Journal of Molecular Biology

Year:

2012

Language:

english

File:

PDF, 982 KB

english, 2012

24

In Silico Functional Profiling of Small Molecules and Its Applications

Sato, Tomohiro, Matsuo, Yo, Honma, Teruki, Yokoyama, Shigeyuki

Journal:

Journal of Medicinal Chemistry

Year:

2008

Language:

english

File:

PDF, 603 KB

english, 2008

25

Structure-Based Generation of a New Class of Potent Cdk4 Inhibitors: New de Novo Design Strategy and Library Design

Honma, Teruki, Hayashi, Kyoko, Aoyama, Tetsuya, Hashimoto, Noriaki, Machida, Takumitsu, Fukasawa, Kazuhiro, Iwama, Toshiharu, Ikeura, Chinatsu, Ikuta, Mari, Suzuki-Takahashi, Ikuko, Iwasawa, Yoshikazu

Journal:

Journal of Medicinal Chemistry

Year:

2001

Language:

english

File:

PDF, 568 KB

english, 2001

26

A Novel Approach for the Development of Selective Cdk4 Inhibitors: Library Design Based on Locations of Cdk4 Specific Amino Acid Residues

Honma, Teruki, Yoshizumi, Takashi, Hashimoto, Noriaki, Hayashi, Kyoko, Kawanishi, Nobuhiko, Fukasawa, Kazuhiro, Takaki, Tohru, Ikeura, Chinatsu, Ikuta, Mari, Suzuki-Takahashi, Ikuko, Hayama, Takashi,

Journal:

Journal of Medicinal Chemistry

Year:

2001

Language:

english

File:

PDF, 637 KB

english, 2001

27

A small-molecule AdipoR agonist for type 2 diabetes and short life in obesity

Okada-Iwabu, Miki, Yamauchi, Toshimasa, Iwabu, Masato, Honma, Teruki, Hamagami, Ken-ichi, Matsuda, Koichi, Yamaguchi, Mamiko, Tanabe, Hiroaki, Kimura-Someya, Tomomi, Shirouzu, Mikako, Ogata, Hitomi, T

Journal:

Year:

2013

Language:

english

File:

PDF, 4.78 MB

english, 2013

28

Structural Basis for Chemical Inhibition of Human Blood Coagulation Factor Xa

Kenji Kamata, Hiroshi Kawamoto, Teruki Honma, Toshiharu Iwama and Sung-Hou Kim

Journal:

Proceedings of the National Academy of Sciences

Year:

1998

Language:

english

File:

PDF, 1.56 MB

english, 1998

29

Total Synthesis of (+)-Obtusenyne

Fujiwara, Kenshu, Awakura, Daisuke, Tsunashima, Misa, Nakamura, Akira, Honma, Teruki, Murai, Akio

Journal:

Journal of Organic Chemistry

Year:

1999

Language:

english

File:

PDF, 49 KB

english, 1999

30

Molecular basis for the reverse reaction of African human trypanosomes glycerol kinase

Balogun, Emmanuel Oluwadare, Inaoka, Daniel Ken, Shiba, Tomoo, Kido, Yasutoshi, Tsuge, Chiaki, Nara, Takeshi, Aoki, Takashi, Honma, Teruki, Tanaka, Akiko, Inoue, Masayuki, Matsuoka, Shigeru, Michels,

Journal:

Molecular Microbiology

Year:

2014

Language:

english

File:

PDF, 21.24 MB

english, 2014

31

An Applicable Platform for Web Interactive Content Hapticization

Chen, Wei Yu, Chu, Yen Ming, Sato, Makoto, Honma, Teruki

Journal:

Advanced Materials Research

Year:

2014

Language:

english

File:

PDF, 1.90 MB

english, 2014

32

Structure-activity Relationship of Glycinoeclepin A

Murai, Akio, Ohkita, Masakazu, Honma, Teruki, Hoshi, Kazuhiro, Tanimoto, Norihiko, Araki, Satoko, Fukuzawa, Akio

Journal:

Chemistry Letters

Year:

1992

File:

PDF, 197 KB

1992

33

Novel Synthesis of a Dihydroxyethylene lsostere of Renin Inhibitors.

ATSUUMI, Shugo, IKEURA, Chinatsu, HONMA, Teruki, MORISHIMA, Hajime

Journal:

CHEMICAL & PHARMACEUTICAL BULLETIN

Year:

1994

File:

PDF, 585 KB

1994

34

Design and synthesis of potent substrate-based inhibitors of the Trypanosoma cruzi dihydroorotate dehydrogenase

Inaoka, Daniel Ken, Iida, Maiko, Hashimoto, Satoshi, Tabuchi, Toshiyuki, Kuranaga, Takefumi, Balogun, Emmanuel Oluwadare, Honma, Teruki, Tanaka, Akiko, Harada, Shigeharu, Nara, Takeshi, Kita, Kiyoshi,

Journal:

Bioorganic & Medicinal Chemistry

Year:

2017

Language:

english

File:

PDF, 886 KB

english, 2017

35

Activity cliff for 7-substituted pyrrolo-pyrimidine inhibitors of HCK explained in terms of predicted basicity of the amine nitrogen

Yuki, Hitomi, Kikuzato, Ko, Koda, Yasuko, Mikuni, Junko, Tomabechi, Yuri, Kukimoto-Niino, Mutsuko, Tanaka, Akiko, Shirai, Fumiyuki, Shirouzu, Mikako, Koyama, Hiroo, Honma, Teruki

Journal:

Bioorganic & Medicinal Chemistry

Year:

2017

Language:

english

File:

PDF, 1.83 MB

english, 2017

36

Bioisostere Identification by Determining the Amino Acid Binding Preferences of Common Chemical Fragments

Sato, Tomohiro, Hashimoto, Noriaki, Honma, Teruki

Journal:

Journal of Chemical Information and Modeling

Year:

2017

Language:

english

File:

PDF, 6.06 MB

english, 2017

37

Prediction of the site of CYP3A4 metabolism of tolterodine by molecular dynamics simulation from multiple initial structures of the CYP3A4-tolterodine complex

Sato, Atsuko, Yuki, Hitomi, Watanabe, Chiduru, Saito, Jun-ichi, Konagaya, Akihiko, Honma, Teruki

Journal:

Chem-Bio Informatics Journal

Year:

2017

Language:

english

File:

PDF, 688 KB

english, 2017

38

Pharmacophore Modeling for Anti-Chagas Drug Design Using the Fragment Molecular Orbital Method

Yoshino, Ryunosuke, Yasuo, Nobuaki, Inaoka, Daniel Ken, Hagiwara, Yohsuke, Ohno, Kazuki, Orita, Masaya, Inoue, Masayuki, Shiba, Tomoo, Harada, Shigeharu, Honma, Teruki, Balogun, Emmanuel Oluwadare, da

Journal:

Year:

2015

Language:

english

File:

PDF, 3.41 MB

english, 2015

39

The Open Form Inducer Approach for Structure-Based Drug Design

Inaoka, Daniel Ken, Iida, Maiko, Tabuchi, Toshiyuki, Honma, Teruki, Lee, Nayoung, Hashimoto, Satoshi, Matsuoka, Shigeru, Kuranaga, Takefumi, Sato, Kazuhito, Shiba, Tomoo, Sakamoto, Kimitoshi, Balogun,

Journal:

Year:

2016

Language:

english

File:

PDF, 2.88 MB

english, 2016

40

Construction of an integrated database for hERG blocking small molecules

Sato, Tomohiro, Yuki, Hitomi, Ogura, Keiji, Honma, Teruki, Song, Chunhua

Journal:

Year:

2018

Language:

english

File:

PDF, 5.76 MB

english, 2018

41

Characterization of crystal water molecules in a high-affinity inhibitor and hematopoietic prostaglandin D synthase complex by interaction energy studies

Takaya, Daisuke, Inaka, Koji, Omura, Akifumi, Takenuki, Kenji, Kawanishi, Masashi, Yabuki, Yukako, Nakagawa, Yukari, Tsuganezawa, Keiko, Ogawa, Naoko, Watanabe, Chiduru, Honma, Teruki, Aritake, Kosuke

Journal:

Bioorganic & Medicinal Chemistry

Year:

2018

Language:

english

File:

PDF, 1.47 MB

english, 2018

42

Towards good correlation between fragment molecular orbital interaction energies and experimental IC50 for ligand binding: A case study of p38 MAP kinase

Sheng, Yinglei, Watanabe, Hirofumi, Maruyama, Keiya, Watanabe, Chiduru, Okiyama, Yoshio, Honma, Teruki, Fukuzawa, Kaori, Tanaka, Shigenori

Journal:

Computational and Structural Biotechnology Journal

Year:

2018

Language:

english

File:

PDF, 870 KB

english, 2018

43

New SIRT2 inhibitors: histidine-based bleomycin spin-off

Ali, Taha F.S., Ciftci, Halil I., Radwan, Mohamed O., Koga, Ryoko, Ohsugi, Takeo, Okiyama, Yoshio, Honma, Teruki, Nakata, Akiko, Ito, Akihiro, Yoshida, Minoru, Fujita, Mikako, Otsuka, Masami

Journal:

Bioorganic & Medicinal Chemistry

Year:

2019

File:

PDF, 1.00 MB

2019

44

New SIRT2 inhibitors: histidine-based bleomycin spin-off

Ali, Taha F.S., Ciftci, Halil I., Radwan, Mohamed O., Koga, Ryoko, Ohsugi, Takeo, Okiyama, Yoshio, Honma, Teruki, Nakata, Akiko, Ito, Akihiro, Yoshida, Minoru, Fujita, Mikako, Otsuka, Masami

Journal:

Bioorganic & Medicinal Chemistry

Year:

2019

Language:

english

File:

PDF, 1.00 MB

english, 2019

45

Bis-Heteroaryl Pyrazoles: Identification of Orally Bioavailable Inhibitors of Activin Receptor-Like Kinase-2 (R206H)

Sekimata, Katsuhiko, Sato, Tomohiro, Sakai, Naoki, Watanabe, Hisami, Mishima-Tsumagari, Chiemi, Taguri, Tomonori, Matsumoto, Takehisa, Fujii, Yoshifumi, Handa, Noriko, Honma, Teruki, Tanaka, Akiko, Sh

Journal:

CHEMICAL & PHARMACEUTICAL BULLETIN

Year:

2019

File:

PDF, 1.68 MB

2019

46

Insights into the ubiquinol/dioxygen binding and proton relay pathways of the alternative oxidase

Shiba, Tomoo, Inaoka, Daniel Ken, Takahashi, Gen, Tsuge, Chiaki, Kido, Yasutoshi, Young, Luke, Ueda, Satoshi, Balogun, Emmanuel Oluwadare, Nara, Takeshi, Honma, Teruki, Tanaka, Akiko, Inoue, Masayuki,

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

2019

Language:

english

File:

PDF, 1.16 MB

english, 2019

47

Development of an automated fragment molecular orbital (FMO) calculation protocol toward construction of quantum mechanical calculation database for large biomolecules

Watanabe, Chiduru, Watanabe, Hirofumi, Okiyama, Yoshio, Takaya, Daisuke, Fukuzawa, Kaori, Tanaka, Shigenori, Honma, Teruki

Journal:

Chem-Bio Informatics Journal

Year:

2019

Language:

english

File:

PDF, 1.53 MB

english, 2019

48

Significance of data selection in deep learning for reliable binding mode prediction of ligands in the active site of CYP3A4

Sato, Atsuko, Tanimura, Naoki, Honma, Teruki, Konagaya, Akihiko

Journal:

CHEMICAL & PHARMACEUTICAL BULLETIN

Year:

2019

Language:

english

File:

PDF, 1003 KB

english, 2019

49

Support Vector Machine model for hERG inhibitory activities based on the integrated hERG database using descriptor selection by NSGA-II

Ogura, Keiji, Sato, Tomohiro, Yuki, Hitomi, Honma, Teruki

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 1.67 MB

english, 2019

50

Discovery of a small molecule inhibitor targeting dengue virus NS5 RNA-dependent RNA polymerase

Shimizu, Hideaki, Saito, Akatsuki, Mikuni, Junko, Nakayama, Emi E., Koyama, Hiroo, Honma, Teruki, Shirouzu, Mikako, Sekine, Shun-ichi, Shioda, Tatsuo, Messer, William B.

Journal:

PLoS Neglected Tropical Diseases

Year:

2019

Language:

english

File:

PDF, 9.90 MB

english, 2019